How warp-speed evolution is transforming ecology


Darwin thought evolution was too slow to change the environment on observable timescales. Ecologists are discovering that he was wrong.
T. bartmani stick insect on plant

The coloration of stick insects such as this Timema bartmani help it to hide, but might also affect the local ecology.

It took Timothy Farkas less than a week to catch and relocate 1,500 stick insects in the Santa Ynez mountains in southern California. His main tool was an actual stick.

“It feels kind of brutish,” says Farkas. “You just pick a stick up off the ground and beat the crap out of a bush.” That low-tech approach dislodged hordes of stick insects that the team easily plucked off the dirt.

On this hillside outside Santa Barbara, there are two kinds of bush that the stick insect (Timema cristinae) inhabits. The creature comes in two corresponding colorations: green and striped. Farkas and his fellow ecologists knew that the stick insects had evolved to blend in with their surroundings. But the researchers wanted to see whether they could turn this relationship around, so that an evolved trait — camouflage — would affect the organism’s ecology.

To find out, the team relocated mixtures of green and striped insects to different plants, so that some insects’ coloration clashed with their new home. Suddenly maladapted, these insects became targets for hungry birds, and that caused a domino effect1. Birds drawn to bushes with mismatched stick insects stuck around to eat other residents, such as caterpillars and beetles, stripping some plants clean. “That this evolutionary force can cause local extinction is striking,” says Farkas, an ecologist at the University of New Mexico in Albuquerque. “It affects the entire community.” All this happened because of an out-of-place evolutionary trait.

Ecologists have generally ignored evolution when studying their systems; they thought it was impossible to test whether such a slow process could change ecosystems on observable timescales. But they have come to realize that evolution can happen more quickly than they assumed, and a wave of studies has capitalized on this idea to observe evolution and ecology in unison.

Such eco-evolutionary dynamics could be important for understanding how new populations emerge, or for predicting when one might go extinct. Experiments suggest that evolutionary changes alter some ecosystems just as much as shifts in more-conventional ecological elements, such as the amount of light reaching a habitat. “Eco-evolutionary dynamics is the dragon lots of people are chasing right now,” says Troy Simon, an ecologist at the University of Georgia in Athens.

Rapid evolution can sometimes offset some of the detrimental effects of a warming climate and other known drivers of change; in other cases, it can worsen those effects. Even for the most common processes, such as changes in population size or food chains, ecologists must take evolution into consideration, researchers say. “Everybody realized rapid evolution was occurring everywhere,” says evolutionary ecologist Andrew Hendry of McGill University in Montreal, Canada.

Darwin in reverse

It all goes back to Charles Darwin’s finches. When the naturalist visited Ecuador’s Galapagos Islands in 1835, he documented some variation in the beaks of finches living on different islands and eating different foods. Years after the voyage, he hinted in his Journal of Researches that this variation suggested a tight relationship between the birds’ ecology and their evolution.

Darwin never imagined seeing this in action, because he thought that evolution occurs only at the “long lapse of ages”. But by the late 1990s, ecologists had started to realize that evolution could be observed within a few generations of a given species — a timescale that they could work with.

Organisms that live and die quickly provided some of the early data demonstrating how evolution influences ecology. A key study2 published in 2003 focused on algae and rotifers, microscopic predators that feed on algae; both species can tick through up to 20 generations in the course of a couple of weeks. The study mixed the organisms together in tanks and showed that when algae evolve rapidly, they throw off normal predator–prey population dynamics.

Usually, the two species play out a cycle between ‘boom’ and ‘bust’. The algal population grows; the rotifers then gobble them up and their own population explodes. When the predators have depleted the algae, their numbers crash. The algae then rebound and the pattern starts again. But when the researchers introduced different algal varieties — seeding some genetic diversity — the algae began to evolve rapidly and the cycle changed completely. The algal population remained elevated for longer, and the rotifers’ own boom was abnormally delayed because the new algae were more resistant to predation.

Similar studies in aphids3 and water fleas4 have confirmed that rapid evolution can affect characteristics of populations, such as how fast they grow. These ecological changes can alter future rounds of evolution and selection. Seeing such rapid evolution in action has changed ecologists’ picture of what they thought was a predictable and fundamental ecological process, and showed how important it is to consider evolution when studying how populations interact. “Everything about ecology has to be re-examined in light of the fact that evolution is more important than we thought,” says Stephen Ellner, an ecologist at Cornell University in Ithaca, New York. “This changes everything.”

Fake lakes

After these initial lab studies, ecologists started to think bigger. Experiments conducted indoors at small scales can’t reproduce the intricacies of natural ecosystems, so researchers have been testing their ideas in grander, less artificial set-ups.

Working out whether eco-evolutionary dynamics affect the real world is one of the field’s biggest challenges, says Rebecca Best, an evolutionary ecologist at Northern Arizona University in Flagstaff, because so many uncontrollable factors can affect wild ecosystems.

She has found a middle ground by incorporating natural elements into a tightly controlled experiment. At a site overlooking Lake Lucerne in Switzerland, she and her team set up 50 miniature lakes: large plastic tanks each holding 1,000 litres of water, plus a slurry of sediment, plant life, algae, invertebrates and water collected from three lakes — Geneva, Constance and Lucerne. Once these ‘mesocosms’ were settled, with plankton reproducing and plants taking root, the team introduced into each tank one of two genetically distinct lineages of adult threespine sticklebacks (Gasterosteus aculeatus): one lineage from Lake Constance and the other from Lake Geneva. A few weeks later, the researchers removed the fish and replaced them with a mixture of lab-raised juveniles from both locations, plus some hybrids of the two lineages.

They found5 that how the adults had manipulated their environments affected the survival of the next generation of fish (see ‘Fishy feedback’). If the adult fish removed prey of a certain size, for example, younger fish that shared characteristics with the adults — in this case, mouth size — went hungry. Juveniles that were different from the former occupants fared better. The study showed that the traits of the adult fish shaped the environment for the next generation — enough to dictate the evolutionary trajectory of those that followed.

Best says that her mesocosm experiments are more sophisticated and realistic than lab studies, but less easy to control. Ideally, she says, the team would run the experiment in the field, but that would come with its own obstacles, such as having to factor in the evolution of other species in the ecosystem, or the risk of events such as extreme storms.

Experiments such as Best’s are “vastly easier and more controlled than anything you can do in nature”, Hendry says. But they might not reflect what happens in real ecosystems. “That’s the watershed moment we’re at right now. Does this actually play out in the real world?”

In the messy real world, it can be difficult to pinpoint the impact of a single feature, either an ecological attribute (such as rainfall) or an evolutionary one (such as a change in camouflage).

A few intrepid ecologists are trying anyway. Last year, a study6 on guppies in Trinidad demonstrated that the fish’s evolution can drive an ecological change as strongly as an environmental factor: the amount of light available.

The study focused on two populations of guppies (Poecilia reticulata) in the northern part of the island. Their habitats differ in several ecological characteristics, including how much shade they receive from the forest canopy, which affects how many algae grow in the streams.

The team moved populations of guppies — which differed in evolved traits such as body proportions and colour — between eight rivers in the watershed, and measured the canopy above the water. In some of the study sites, introducing a new kind of guppy altered algal populations as much as allowing 20% more light to stream onto the water did. Even a natural ecosystem, say the researchers, is a product of evolution as well as ecology.

This experiment did use a more natural setting than many others, but Trinidadian guppies are ecological celebrities that have appeared in hundreds of studies, and the rivers they inhabit have been highly manipulated already. Researchers want to know whether the forces at work in the guppy populations also play out in species that are not necessarily famous for evolutionary dynamics, says McGill ecologist Gregor Fussmann. “We need systems that are generic,” he says.

Lizard limbs

That’s exactly what Thomas Schoener, an evolutionary ecologist at the University of California, Davis, and his team have set out to do with two populations of lizard in the Bahamas. Their project is part of an ongoing multigenerational study, begun in 1977. They have been attempting to simulate accelerated evolution by catching curly-tailed lizards (Leiocephalus carinatus) and moving them to a string of tiny islands inhabited by brown anoles (Anolis sagrei), to see how the ecosystems change as a result.

Curly-tails are natural predators of the smaller brown anole, so when the team first moved the curly-tails onto islands with the anoles, populations of the latter dropped7. Spider populations increased when anoles — their main predator — took a hit, and the excess spiders then ate more springtail insects (Collembola). Researchers spotted surviving anoles fleeing to the trees to escape their new predator, and that triggered damage to plants. The team knew from previous work8 that anoles adapt fairly quickly to tree climbing by favouring shorter-limbed offspring.

Curly-tailed lizard in Cuba

A curly tailed lizard (Leiocephalus carinatus).Credit: Dov Makabaw Cuba/Alamy

But then something unexpected happened. Hurricane Irene hit the islands in 2011, followed by Hurricane Sandy in 2012. Populations of both anoles and curly-tailed lizards crashed. On some islands, anoles were completely wiped out after the storm.

“The hurricanes are a mixed blessing because on the one hand, they give us all kinds of interesting data about disturbance,” Schoener says. “But on the other hand, it can slow down what might be a normal progression of evolution.”

The team has managed to keep its project on track, and is observing evolutionary changes in leg length and the lizards’ re-colonization of the islands after the hurricane.

Surprisingly, the anoles that survived the storm have longer limbs than the pre-hurricane population7 — the opposite of the team’s prediction, but perhaps better for holding on to branches tightly during a storm. The team has just received funding to study how this evolutionary change will affect the ecosystem.

The hurricanes certainly complicated Schoener’s study, but other researchers appreciate the unplanned intervention because it provides a chance to study the consequences of real events and watch the lizards recolonize the islands. Even in the absence of a natural disaster, any number of dynamics could also change the course of an organism’s evolution, says Best. “Those potential interactions are going on for everything in the ecosystem.”

She and others say there is plenty more to do, both in the lab and in more-elaborate field studies. Some researchers want to add genetic data to their work, to understand what is driving evolution in the first place. This would tell them whether a particular trait — growth rate, for example — is truly heritable and evolving, rather than a characteristic that can be directly affected by an animal’s environment. Genomic data could also help to find hidden characteristics — those harder to observe than body size or growth rate — that might affect ecology.

In a study9 of algae and rotifers, Lutz Becks, an evolutionary ecologist at the Max Planck Institute for Evolutionary Biology in Plön, Germany, and his colleagues watched several cycles in which populations waxed and waned as the algae clumped together and dispersed. But when the team looked at individual genes underlying clumping behaviour, they found that their expression varied wildly from one cycle to the next, even though the clumping looked the same. They have since observed co-evolution of three species at once — algae, rotifers and a virus — and found10 that the rotifers slowed the rate at which the algae and virus co-evolved. The team plans to repeat this type of experiment, analysing genome data to see how specific details of the algal and viral genes change over time. “We’d like to get to a point where we can actually predict what genomic architecture might be needed for rapid evolution,” says Becks.

Rapid evolution can offset — at least partially — the damaging effects of climate change and other ecological disturbances. In 2011, for instance, a group led by Ellner reanalysed11 35 years of data from dormant eggs of Daphnia water fleas, exhumed from a sediment core in Lake Constance. The data represented periods before, during and after a time when the lake was affected by blooms of cyanobacteria, a microbe with low nutritional value for Daphnia. The team found that as the Daphnia’s food became less nutritious, juvenile fleas grew poorly and ended up as smaller adults. But after several generations, evolutionary changes caused the growth rate of juveniles to return to normal. And the adults regained some of their lost stature, although they didn’t reach the same size as they had before the blooms. The researchers suggest that rapid evolution is likely to occur most often when the environment is changing, but the effects are hidden because they pull in opposite directions. “Evolution is going to be part of how the biosphere responds to climate change,” Ellner says.

Farkas has these questions about evolution and ecology at the front of his mind as he beats the bushes around Santa Barbara and sorts his stick insects. He and his team are planning even more elaborate schemes. They want to catch a full feedback cycle unfolding — ecology affecting evolution affecting ecology once more — all while collecting genetic data. “Comparing how large these effects of evolution will be and understanding when and where evolution is happening is going to be important,” says Farkas. “To me, it’s the final frontier. But it’s going to take a really long time.”

 

Source: Nature

JEREMY ENGLAND, THE MAN WHO MAY ONE-UP DARWIN


Because this guy could change the way we think about evolution — and faith.

 On a sunny afternoon, at a bustling cafe less than a mile from Stanford University’s campus, near Palo Alto, and more than 5,000 miles from his home, an assistant professor from MIT is telling me about science. Very advanced science. His name is Jeremy England, and at 33, he’s already being called the next Charles Darwin.

Say what?

In town to give a lecture, the Harvard grad and Rhodes scholar speaks quickly, his voice rising a few pitches in tone, his long-fingered hands making sudden jerks when he’s excited. He’s skinny, with a long face, scraggly beard and carelessly groomed mop of sandy brown hair — what you might expect from a theoretical physicist. But then there’s the street-style Adidas on his feet and the kippah atop his head. And the fact that this scientist also talks a lot about God.

EVERY 30 YEARS OR SO WE EXPERIENCE THESE GIGANTIC STEPS FORWARD. …AND THIS MIGHT BE IT.

Carl Franck, a Cornell physics professor

The 101 version of his big idea is this: Under the right conditions, a random group of atoms will self-organize, unbidden, to more effectively use energy. Over time and with just the right amount of, say, sunlight, a cluster of atoms could come remarkably close to what we call life. In fact, here’s a thought: Some things we consider inanimate actually may already be “alive.” It all depends on how we define life, something England’s work might prompt us to reconsider. “People think of the origin of life as being a rare process,” says Vijay Pande, a Stanford chemistry professor. “Jeremy’s proposal makes life a consequence of physical laws, not something random.”

England’s idea may sound strange, even incredible, but it’s drawn the attention of an impressive posse of high-level academics. After all, while Darwinism may explain evolution and the complex world we live in today, it doesn’t account for the onset of intelligent beings. England’s insistence on probing for the step that preceded all of our current assumptions about life is what makes him stand out, says Carl Franck, a Cornell physics professor, who’s been following England’s work closely. “Every 30 years or so we experience these gigantic steps forward,” Franck says. “We’re due for one. And this might be it.”

And all from a modern Orthodox Jew with fancy sneakers.

****

Before England became a religious man — he prays three times a day — he was a scientist. From the time he could read, he devoured books on subjects from philosophy to music to fantasy. By 9 he was plowing his way through Stephen Hawking’s opus, A Brief History of Time . “He couldn’t comprehend it, but he tried really hard,” says his father, Richard England, an economics professor at the University of New Hampshire. Yes, Dad is an economics professor and Mom a public school teacher, and the couple took their two children to museums and to visit the Harvard campus, just a few hours from their small seacoast town. But the elder England contends his son’s upbringing doesn’t begin to explain his intellectual curiosity.

Or England’s long timeline of asking big questions. Over drinks some years ago, a childhood friend reminded him of a time that young Jeremy turned to him out of nowhere and reflected: “You know, Adam, if the dinosaurs can go extinct, then so can we.” England was 3 then. For his part, England says it wasn’t until he hit about 7 that he felt a sense of anxiety about “not knowing enough.” That anxiety would compel him through an almost comical list of academic bastions — Harvard, Oxford, Stanford and Princeton, and now, a 3-year-old teaching gig at MIT.

Still, God wasn’t a big player for England during most of his early life. While his mom is Jewish — his dad was raised Lutheran but never felt strongly about passing on his Protestant ties — there wasn’t a lot of religious talk while he was growing up. The Englands would share a festive meal for Passover and light candles for Hanukkah, but the family didn’t keep a Bible in the home. His mother, England says, was born in Poland in 1947 to a family ravaged by the Holocaust. Much of her extended family — including her grandparents — were killed by the Nazis, and in the wake of such destruction, England says, Judaism brought up negative, painful feelings for her; she distanced herself.

It seems ironic, then, that anti-Semitism would eventually push England to the faith he says his mother spurned. While studying at Oxford in the early 2000s, he faced his first anti-Israel sentiment from classmates — which got him, in expected fashion, reading books and picking people’s brains to figure out where he stood on the issue. And in 2005, he visited Israel for the first time — where he “fell in love.” Studying the Torah provided an opportunity for intellectual engagement that he says was “unlike anything I had ever experienced in terms of subtlety and grandeur of scope.”

Back in Palo Alto, between meeting with Berkeley professors and Stanford students, England reboots his computer to show me a simulation he’s been working on, meanwhile explaining that his lab is less test tubes and white coats than blackboards and computers screens. Jet-setting across the country to talk about his theories isn’t England’s usual routine. That, he says, looks more like dirty diapers, brainstorming atop a yoga ball with his infant son, working with students and plugging data into formulas.

England didn’t begin with number-crunching, though. During his postdoc research on embryonic development, he kept coming back to the question: What qualifies something as alive or not? He later superimposed an analytical rigor to that question, publishing an equation in 2013 about how much energy is required for self-replication to take place. For England, that investigation was only the beginning. “I couldn’t stop thinking about it,” he says, his normally deep voice rising until eventually cracking. “It was so frustrating.” Over the next year, he worked on a second paper, which is under peer review now. This one took his past findings and used them to explain theoretically how, under certain physical circumstances, life could emerge from nonlife.

In the most basic terms, Darwinism and the idea of natural selection tell us that well-adapted organisms evolve in order to survive and better reproduce in their environment. England doesn’t dispute this reasoning, but he argues that it’s too vague. For instance, he says, blue whales and phytoplankton thrive in the same environmental conditions — the ocean — but they do so by vastly different means. That’s because that while they’re both made of the same basic building blocks, strings of DNA are arranged differently in each organism.

Now take England’s simulation of an opera singer who holds a crystal glass and sings at a certain pitch. Instead of shattering, England predicts that over time, the atoms will rearrange themselves to better absorb the energy the singer’s voice projects, essentially protecting the glass’s livelihood. So how’s a glass distinct from, say, a plankton-type organism that rearranges it self over several generations? Does that make glass a living organism?

These are pretty things to ponder. Unfortunately, England’s work hasn’t yet provided any answers, leaving the professor in a kind of speculative state as he doggedly tries to put numbers to it all. “He hasn’t put enough cards on the table yet,” Franck says. “He’ll need to make more testable predictions.” So it remains to be seen where England will land in the end. Other scientists have made similar claims about energy dissipation in the context of non-equilibrium thermodynamics, but none has found a definitive means for applying this science to the origin of life.

So what does God have to do with all this? In his quest for answers, England, of course, finds himself at the center of the classic struggle between science and spirituality. While Christianity and Darwinism are generally opposed, Judaism doesn’t take issue with the science of life. The Rabbinical Council of America even takes the stance that “evolutionary theory, properly understood, is not incompatible with belief in a Divine Creator.”

For his part, England believes science can give us explanations and predictions, but it can never tell us what we should do with that information. That’s where, he says, the religious teachings come in. Indeed, the man who’s one-upping Darwin has spent the past 10 years painstakingly combing through the Torah, interpreting it word by word much the way he ponders the meaning of life. His conclusion? Common translations are lacking. Take the term “creation.” England suggests we understand it not as the literal making of the Earth but rather as giving Earth a name. All throughout the Bible, he says, there are examples of terms that could be interpreted differently from what we’ve come to accept as standard.

That even applies to some of the good book’s most famous players, like Joseph, the ancient biblical interpreter of dreams, who rose to become the most powerful man in Egypt after the pharaoh. Maybe, England suggests, he wasn’t a fortune-teller. Maybe he was a scientist.

Einstein, Darwin and Hawking Battle Each Other With Superpowers in New Video Game


Some of the greatest minds in history are being given superpowers in an awesomely addictive new game called Science Kombat.

PHOTO: Science Kombat is a web based game that pits some of historys greatest minds against each other.

Let’s take it a step further: Imagine those great minds were then pitted against each other in a hand-to-hand combat game with their superpowers used to battle each other.

The web-based game, which was released by Brazilian magazine Superinteressante, stars eight geniuses: Pythagoras, Albert Einstein, Nikola Tesla, Isaac Newton, Charles Darwin, Marie Curie, Alan Turing and Stephen Hawking, the only virtual contestant who is still alive today.

PHOTO: Science Kombat is a web based game that pits some of historys greatest minds against each other.

Each scientist’s superpower is based on their contributions to the scientific world, so Stephen Hawking can sneak into a worm hole or fire a black hole at his opponent. Marie Curie can shoot polonium and radium with her hands, while Pythagoras can unleash a powerful Pythagorean theorem-style jump, sliding down the hypotenuse of the triangle and ambushing his opponent.
PHOTO: Science Kombat is a web based game that pits some of historys greatest minds against each other.

Charles Darwin to receive apology from the Church of England for rejecting evolution.


The Church of England is to apologise to Charles Darwin for its initial rejection of his theories, nearly 150 years after he published his most famous work.

The Church of England will concede in a statement that it was over-defensive and over-emotional in dismissing Darwin’s ideas. It will call “anti-evolutionary fervour” an “indictment” on the Church”.

Charles Darwin to receive apology from the Church of England for rejecting evolution

The bold move is certain to dismay sections of the Church that believe in creationism and regard Darwin’s views as directly opposed to traditional Christian teaching.

The apology, which has been written by the Rev Dr Malcolm Brown, the Church’s director of mission and public affairs, says that Christians, in their response to Darwin’s theory of natural selection, repeated the mistakes they made in doubting Galileo’s astronomy in the 17th century.

“The statement will read: Charles Darwin: 200 years from your birth, the Church of England owes you an apology for misunderstanding you and, by getting our first reaction wrong, encouraging others to misunderstand you still. We try to practise the old virtues of ‘faith seeking understanding’ and hope that makes some amends.”

Opposition to evolutionary theories is still “a litmus test of faithfulness” for some Christian movements, the Church will admit. It will say that such attitudes owe much to a fear of perceived threats to Christianity.